programming

Data Management Consultation

Expert help with:

  • Data extraction services - first step for access to patient data sets from UCSF Medical Center (APeX) and Zuckerberg San Francisco General (ZSFG)
  • Data de-identification consultation
  • Data cleaning & formatting, merging datasets
  • General management advice
  • Choosing platform
  • Querying existing database
  • REDCap database advice
  • Grant preparation
  • Natural Language Processing (NLP)
  • Using large public databases
  • Other data management issues
Hourly Recharge, first hour free per project
Clinical & Translational Science Institute (CTSI)
CTSI Consulting
ctsi.consulting@ucsf.edu
415-514-8021

Computational Biology Core (CBC)

Expertise in genetics, bioinformatics, computer science and statistics with long-term experience in high-throughput sequencing, microarrays, and other genomic and proteomic technologies.

  • Scientific and study design consultation
  • Data analysis
  • Software development
  • High performance computing
  • Grant and manuscript assistance
Access: 

Prioritized toward members of the UCSF Helen Diller Family Comprehensive Cancer Center, but support available to outside investigators as time permits. Contact by email or phone

Hourly Recharge, first hour free per project
Cancer Center

Cancer Center Translational Informatics Core

Data systems and applications to directly support all clinical, biomedical and translational research goals.

  • Access & training for clinical & biomedical software tools
  • Research data management solutions such as design of data collection models
  • Biospecimen data management

 

Access: 

Contact for more information

Request information
Cancer Center
Thomas Cunningham
thomas.cunningham@ucsf.edu

Data Systems Services

Provides data collection, cleaning, and storage services to research investigators.

  • Cloud computing and server/desktop virtualization, hosted within the UCSF network and compliant with NIST-mandated security protocols
  • Customized programming and data services
  • Customized databases for outcome ascertainment studies
Access: 

For more information about these services, please contact dss@psg.ucsf.edu

Request information
Department of Epidemiology and Biostatistics
Contact
dss@psg.ucsf.edu